BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018B10LP1|AL427271
(888 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1564 1736 0.0
>3x_Contig1564
Length = 11038
Score = 1736 bits (874), Expect = 0.0
Identities = 884/888 (99%), Gaps = 1/888 (0%)
Strand = Plus / Plus
Query: 1 gatctctgtctagaaaatcagtcgcatcatctctgtcttctgcggaatccttggaagcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7851 gatctctgtctagaaaatcagtcgcatcatctctgtcttctgcggaatccttggaagcta 7910
Query: 61 cctcaactggcggtagcttgactcgtaaaataggttctaagatgaaaaaagttatcaccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7911 cctcaactggcggtagcttgactcgtaaaataggttctaagatgaaaaaagttatcaccg 7970
Query: 121 gagagaagaggggcttttcaaccattagaagtgcacaaaataccggtgaaagcgtaaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7971 gagagaagaggggcttttcaaccattagaagtgcacaaaataccggtgaaagcgtaaaat 8030
Query: 181 ccgcatttaacgcattaagaaagggaatttcctcaatgcagttcactggtgatagcagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8031 ccgcatttaacgcattaagaaagggaatttcctcaatgcagttcactggtgatagcagtt 8090
Query: 241 ccagaaaatcatctttagaagcaagavagtatagaagtacttcaggcaaatccattcctg 300
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 8091 ccagaaaatcatctttagaagcaagaaagtatagaagtacttcaggcaaatccattcctg 8150
Query: 301 aaaatacttcttctaacaccaaatcccataggcggtccaccagctcgttttccttcgttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8151 aaaatacttcttctaacaccaaatcccataggcggtccaccagctcgttttccttcgttc 8210
Query: 361 cggaaaataatgactatgaattgatcgaagatatacaaaaggagaaaccaaaatcatcac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8211 cggaaaataatgactatgaattgatcgaagatatacaaaaggagaaaccaaaatcatcac 8270
Query: 421 tgagaagatcctcttccttgaaaacttcatcttcgatccagaagcgcgttaaagatctaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8271 tgagaagatcctcttccttgaaaacttcatcttcgatccagaagcgcgttaaagatctaa 8330
Query: 481 tcaatgcagatgatatacccaatcgctcttctgccactggatacgggaaatatactgata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8331 tcaatgcagatgatatacccaatcgctcttctgccactggatacgggaaatatactgata 8390
Query: 541 ttgggaggaaaaccgatatatctgaccaccataaatccaatgcaaatcgtaaatcaagta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8391 ttgggaggaaaaccgatatatctgaccaccataaatccaatgcaaatcgtaaatcaagta 8450
Query: 601 cagtgatcactcctgtgcatgaggctcctaaatccaaaccagcaccgccacccaaaccag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8451 cagtgatcactcctgtgcatgaggctcctaaatccaaaccagcaccgccacccaaaccag 8510
Query: 661 ctcatttgaagccaaatcttccacctaagcctaaacacctaaaggcaaaatctttcagaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8511 ctcatttgaagccaaatcttccacctaagcctaaacacctaaaggcaaaatctttcagaa 8570
Query: 721 caagcccagcaaaatccgaagttaaagagcaggattccgatcaagattctgtgggtagcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8571 caagcccagcaaaatccgaagttaaagagcaggattccgatcaagattctgtgggtagcc 8630
Query: 781 ctttccaatctcgaaaagaaatgaaagagtttgaaagaagatttcmaagtgcattataga 840
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 8631 ctttccaatctcgaaaagaaatgaaagagtttgaaagaagatttccaagtgcattataga 8690
Query: 841 atactttttaaaattamatatatctttataatgatattctaattattc 888
|||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 8691 atac-ttttaaaattacatatatctttataatgatattctaattattc 8737
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6898
Number of Sequences: 1807
Number of extensions: 6898
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 888
length of database: 10,358,551
effective HSP length: 16
effective length of query: 872
effective length of database: 10,329,639
effective search space: 9007445208
effective search space used: 9007445208
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)